Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn2B2RVW2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn2B2RVW2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn2B2RVW2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Gm25144-201ENSMUST00000179561 110 ntBASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Gm25352-201ENSMUST00000179815 110 ntBASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Gm9063-201ENSMUST00000223299 582 ntBASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn2B2RVW2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Gm15487-201ENSMUST00000122373 465 ntBASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Clrn2B2RVW2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Gm13823-201ENSMUST00000119930 345 ntBASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn2B2RVW2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Gm14767-201ENSMUST00000121559 586 ntBASIC17.4■□□□□ 0.38
Clrn2B2RVW2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn2B2RVW2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms