Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2d4bA6X942 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2d4bA6X942 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2d4bA6X942 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Gm18489-201ENSMUST00000172565 551 ntBASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Gm9682-201ENSMUST00000197505 556 ntBASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4bA6X942 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4bA6X942 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Gm13365-201ENSMUST00000121188 973 ntBASIC16.17■□□□□ 0.18
Sh2d4bA6X942 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4bA6X942 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sh2d4bA6X942 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sh2d4bA6X942 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4bA6X942 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.16■□□□□ 0.18
Sh2d4bA6X942 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4bA6X942 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4bA6X942 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sh2d4bA6X942 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4bA6X942 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms