Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Shroom2A2ALU4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Shroom2A2ALU4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Shroom2A2ALU4 Gm13050-201ENSMUST00000122149 1345 ntBASIC23.45■■□□□ 1.34
Shroom2A2ALU4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Shroom2A2ALU4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Shroom2A2ALU4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Shroom2A2ALU4 Gm14452-201ENSMUST00000118680 1632 ntBASIC23.45■■□□□ 1.34
Shroom2A2ALU4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Shroom2A2ALU4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Shroom2A2ALU4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC23.44■■□□□ 1.34
Shroom2A2ALU4 AC164567.1-201ENSMUST00000219185 960 ntBASIC23.44■■□□□ 1.34
Shroom2A2ALU4 Gm10012-201ENSMUST00000078252 192 ntBASIC23.44■■□□□ 1.34
Shroom2A2ALU4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom2A2ALU4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom2A2ALU4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom2A2ALU4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom2A2ALU4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom2A2ALU4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
Shroom2A2ALU4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Gm37986-201ENSMUST00000193285 383 ntBASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Gm5763-201ENSMUST00000155951 1530 ntBASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Gm24514-201ENSMUST00000174961 285 ntBASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Gm40466-201ENSMUST00000212174 422 ntBASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom2A2ALU4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Rarb-207ENSMUST00000225921 2756 ntBASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Gm7556-201ENSMUST00000201178 1084 ntBASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Shroom2A2ALU4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Gm38341-201ENSMUST00000195357 515 ntBASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Gm45880-201ENSMUST00000213041 853 ntBASIC23.41■■□□□ 1.34
Shroom2A2ALU4 CT573034.1-201ENSMUST00000222983 313 ntBASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom2A2ALU4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Gm38000-201ENSMUST00000192390 1215 ntBASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Mir433-201ENSMUST00000093564 124 ntBASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom2A2ALU4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom2A2ALU4 AC113441.2-201ENSMUST00000221538 1468 ntBASIC23.39■■□□□ 1.34
Shroom2A2ALU4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom2A2ALU4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms