Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm43575-201ENSMUST00000196420 516 ntBASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5-1A0A075B5Z7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5-1A0A075B5Z7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5-1A0A075B5Z7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.96□□□□□ -0.34
Trav5-1A0A075B5Z7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav5-1A0A075B5Z7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm26308-201ENSMUST00000157768 69 ntBASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trav5-1A0A075B5Z7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Rprl2-201ENSMUST00000157150 290 ntBASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Rpph1-201ENSMUST00000175096 319 ntBASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms