Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
H2afb3S4R1G7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Gm7506-201ENSMUST00000207758 815 ntBASIC13.64□□□□□ -0.23
H2afb3S4R1G7 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.64□□□□□ -0.23
H2afb3S4R1G7 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H2afb3S4R1G7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
H2afb3S4R1G7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Gm27357-201ENSMUST00000183754 135 ntBASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms