Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nubp1Q9R060 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nubp1Q9R060 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nubp1Q9R060 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nubp1Q9R060 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nubp1Q9R060 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nubp1Q9R060 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Nubp1Q9R060 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.33□□□□□ -0.28
Nubp1Q9R060 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Gm43767-201ENSMUST00000198933 381 ntBASIC13.33□□□□□ -0.28
Nubp1Q9R060 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.33□□□□□ -0.28
Nubp1Q9R060 AC165260.5-201ENSMUST00000224640 1247 ntBASIC13.33□□□□□ -0.28
Nubp1Q9R060 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
Nubp1Q9R060 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.32□□□□□ -0.28
Nubp1Q9R060 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.32□□□□□ -0.28
Nubp1Q9R060 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms