Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SrfQ9JM73 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SrfQ9JM73 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SrfQ9JM73 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.21□□□□□ -0.13
SrfQ9JM73 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.21□□□□□ -0.13
SrfQ9JM73 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.21□□□□□ -0.13
SrfQ9JM73 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Gm44855-201ENSMUST00000205725 362 ntBASIC14.21□□□□□ -0.13
SrfQ9JM73 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.21□□□□□ -0.13
SrfQ9JM73 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.21□□□□□ -0.13
SrfQ9JM73 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SrfQ9JM73 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SrfQ9JM73 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SrfQ9JM73 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SrfQ9JM73 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SrfQ9JM73 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.14
SrfQ9JM73 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SrfQ9JM73 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SrfQ9JM73 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SrfQ9JM73 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.2□□□□□ -0.14
SrfQ9JM73 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.2□□□□□ -0.14
SrfQ9JM73 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.2□□□□□ -0.14
SrfQ9JM73 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.2□□□□□ -0.14
SrfQ9JM73 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.2□□□□□ -0.14
SrfQ9JM73 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.2□□□□□ -0.14
SrfQ9JM73 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SrfQ9JM73 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SrfQ9JM73 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SrfQ9JM73 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.19□□□□□ -0.14
SrfQ9JM73 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SrfQ9JM73 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.19□□□□□ -0.14
SrfQ9JM73 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SrfQ9JM73 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SrfQ9JM73 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SrfQ9JM73 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.19□□□□□ -0.14
SrfQ9JM73 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SrfQ9JM73 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.19□□□□□ -0.14
SrfQ9JM73 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SrfQ9JM73 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SrfQ9JM73 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SrfQ9JM73 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SrfQ9JM73 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SrfQ9JM73 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SrfQ9JM73 Gm24694-201ENSMUST00000180054 110 ntBASIC14.19□□□□□ -0.14
SrfQ9JM73 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.19□□□□□ -0.14
SrfQ9JM73 Gm27663-201ENSMUST00000184839 110 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms