Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Crlf1Q9JM58 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.11□□□□□ -0.47
Crlf1Q9JM58 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.11□□□□□ -0.47
Crlf1Q9JM58 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Crlf1Q9JM58 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Gm24543-201ENSMUST00000103867 82 ntBASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Gm14042-201ENSMUST00000120139 833 ntBASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.1□□□□□ -0.47
Crlf1Q9JM58 AY702102-202ENSMUST00000194651 1173 ntBASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.1□□□□□ -0.47
Crlf1Q9JM58 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Crlf1Q9JM58 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Gm17150-201ENSMUST00000165577 381 ntBASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Crlf1Q9JM58 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Crlf1Q9JM58 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Crlf1Q9JM58 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.08□□□□□ -0.48
Crlf1Q9JM58 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Crlf1Q9JM58 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms