Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps35Q9EQH3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps35Q9EQH3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Gm8318-201ENSMUST00000182954 872 ntBASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Gm27628-201ENSMUST00000184911 107 ntBASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps35Q9EQH3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Gm7787-201ENSMUST00000216858 688 ntBASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps35Q9EQH3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Grk6-207ENSMUST00000225925 2769 ntBASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms