Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Chmp2aQ9DB34 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2aQ9DB34 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2aQ9DB34 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Gm6443-201ENSMUST00000203599 874 ntBASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp2aQ9DB34 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms