Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC11.46□□□□□ -0.57
Chchd1Q9CQA6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chchd1Q9CQA6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Chchd1Q9CQA6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chchd1Q9CQA6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chchd1Q9CQA6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chchd1Q9CQA6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Chchd1Q9CQA6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Chchd1Q9CQA6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chchd1Q9CQA6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chchd1Q9CQA6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chchd1Q9CQA6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chchd1Q9CQA6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Chchd1Q9CQA6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms