Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Krt88Q9CPR6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Gm25406-201ENSMUST00000157599 105 ntBASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Gm7889-201ENSMUST00000185591 958 ntBASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Krt88Q9CPR6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Gm6433-201ENSMUST00000118634 875 ntBASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Gm22697-201ENSMUST00000175194 63 ntBASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Gm18101-201ENSMUST00000215769 548 ntBASIC13.67□□□□□ -0.22
Krt88Q9CPR6 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.67□□□□□ -0.22
Krt88Q9CPR6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Krt88Q9CPR6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Krt88Q9CPR6 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.66□□□□□ -0.22
Krt88Q9CPR6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms