Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Gm15198-201ENSMUST00000117283 177 ntBASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Gm42693-201ENSMUST00000196779 631 ntBASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh15Q99PJ1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh15Q99PJ1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Gm27839-201ENSMUST00000184242 106 ntBASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Dancr-204ENSMUST00000132389 2347 ntBASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh15Q99PJ1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh15Q99PJ1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms