Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh23Q99PF4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.22■□□□□ 0.03
Cdh23Q99PF4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Gm23931-201ENSMUST00000103842 109 ntBASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Gm27892-201ENSMUST00000185017 106 ntBASIC15.22■□□□□ 0.03
Cdh23Q99PF4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh23Q99PF4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Gm12176-201ENSMUST00000121420 875 ntBASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.21■□□□□ 0.03
Cdh23Q99PF4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh23Q99PF4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cdh23Q99PF4 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.21■□□□□ 0.02
Cdh23Q99PF4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh23Q99PF4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.21■□□□□ 0.02
Cdh23Q99PF4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh23Q99PF4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh23Q99PF4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Cdh23Q99PF4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh23Q99PF4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh23Q99PF4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh23Q99PF4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms