Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Gm8344-201ENSMUST00000119813 856 ntBASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Gm27704-201ENSMUST00000185094 107 ntBASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Gm18622-201ENSMUST00000219361 595 ntBASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Nkd1Q99MH6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Gm7284-201ENSMUST00000131667 944 ntBASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkd1Q99MH6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Gm4459-201ENSMUST00000118750 468 ntBASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Gm12497-201ENSMUST00000138778 237 ntBASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkd1Q99MH6 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.27□□□□□ -0.12
Nkd1Q99MH6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkd1Q99MH6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nkd1Q99MH6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.27□□□□□ -0.12
Nkd1Q99MH6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkd1Q99MH6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkd1Q99MH6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms