Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cstf1Q99LC2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Gm6973-201ENSMUST00000117080 721 ntBASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Gm7653-201ENSMUST00000214567 508 ntBASIC15.13■□□□□ 0.01
Cstf1Q99LC2 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Gm6888-201ENSMUST00000221983 706 ntBASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cstf1Q99LC2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Gm7730-201ENSMUST00000212486 454 ntBASIC15.12■□□□□ 0.01
Cstf1Q99LC2 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.12■□□□□ 0.01
Cstf1Q99LC2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.12■□□□□ 0.01
Cstf1Q99LC2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cstf1Q99LC2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cstf1Q99LC2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Cstf1Q99LC2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cstf1Q99LC2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cstf1Q99LC2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cstf1Q99LC2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cstf1Q99LC2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cstf1Q99LC2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cstf1Q99LC2 Gm11543-201ENSMUST00000120758 370 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms