Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdk9Q99J95 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.29■□□□□ 0.04
Cdk9Q99J95 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 AA414768-201ENSMUST00000121924 1257 ntBASIC15.29■□□□□ 0.04
Cdk9Q99J95 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdk9Q99J95 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.29■□□□□ 0.04
Cdk9Q99J95 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.29■□□□□ 0.04
Cdk9Q99J95 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdk9Q99J95 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.28■□□□□ 0.04
Cdk9Q99J95 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdk9Q99J95 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.27■□□□□ 0.04
Cdk9Q99J95 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.27■□□□□ 0.04
Cdk9Q99J95 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.27■□□□□ 0.04
Cdk9Q99J95 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.27■□□□□ 0.04
Cdk9Q99J95 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdk9Q99J95 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.27■□□□□ 0.03
Cdk9Q99J95 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk9Q99J95 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk9Q99J95 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk9Q99J95 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms