Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Gm15427-201ENSMUST00000117288 531 ntBASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Gm11594-201ENSMUST00000122313 162 ntBASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Gm37935-201ENSMUST00000192012 982 ntBASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdha2Q91Y17 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Rpph1-201ENSMUST00000175096 319 ntBASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdha2Q91Y17 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha2Q91Y17 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha2Q91Y17 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha2Q91Y17 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha2Q91Y17 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha2Q91Y17 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha2Q91Y17 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.08■□□□□ 0.17
Pcdha2Q91Y17 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha2Q91Y17 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Gm16026-204ENSMUST00000162652 683 ntBASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Gm20553-201ENSMUST00000204205 844 ntBASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha2Q91Y17 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdha2Q91Y17 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha2Q91Y17 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha2Q91Y17 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha2Q91Y17 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdha2Q91Y17 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms