Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3d19Q91X43 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Gm11745-201ENSMUST00000121669 448 ntBASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Gm43767-201ENSMUST00000198933 381 ntBASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3d19Q91X43 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.73■□□□□ 0.11
Sh3d19Q91X43 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.73■□□□□ 0.11
Sh3d19Q91X43 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3d19Q91X43 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.72■□□□□ 0.11
Sh3d19Q91X43 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3d19Q91X43 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3d19Q91X43 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3d19Q91X43 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3d19Q91X43 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3d19Q91X43 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms