Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cspg4Q8VHY0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Gm22189-201ENSMUST00000103822 86 ntBASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Gm12957-201ENSMUST00000117835 377 ntBASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cspg4Q8VHY0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Gm16026-204ENSMUST00000162652 683 ntBASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Gm44344-201ENSMUST00000200287 129 ntBASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cspg4Q8VHY0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Gm10499-201ENSMUST00000174094 934 ntBASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg4Q8VHY0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Shd-206ENSMUST00000225145 998 ntBASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms