Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Gm21899-201ENSMUST00000190745 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21910-201ENSMUST00000191163 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21849-201ENSMUST00000191571 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm28678-201ENSMUST00000191593 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm20910-201ENSMUST00000193268 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Gm21871-201ENSMUST00000194621 696 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Shd-206ENSMUST00000225145 998 ntBASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vopp1Q8R1C3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vopp1Q8R1C3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Gm9719-201ENSMUST00000162765 543 ntBASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Gm2423-201ENSMUST00000074863 733 ntBASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vopp1Q8R1C3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Asic1-205ENSMUST00000228185 1818 ntBASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Gm8410-201ENSMUST00000117225 605 ntBASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Gm45098-201ENSMUST00000207179 657 ntBASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vopp1Q8R1C3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vopp1Q8R1C3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vopp1Q8R1C3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vopp1Q8R1C3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vopp1Q8R1C3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vopp1Q8R1C3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms