Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smc4Q8CG47 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.61■□□□□ 0.57
Smc4Q8CG47 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.61■□□□□ 0.57
Smc4Q8CG47 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smc4Q8CG47 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.61■□□□□ 0.57
Smc4Q8CG47 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc4Q8CG47 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.6■□□□□ 0.57
Smc4Q8CG47 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.6■□□□□ 0.57
Smc4Q8CG47 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.6■□□□□ 0.57
Smc4Q8CG47 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Gm18057-201ENSMUST00000208220 503 ntBASIC18.6■□□□□ 0.57
Smc4Q8CG47 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Celf4-206ENSMUST00000224553 1729 ntBASIC18.6■□□□□ 0.57
Smc4Q8CG47 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.6■□□□□ 0.57
Smc4Q8CG47 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc4Q8CG47 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Smc4Q8CG47 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.58■□□□□ 0.57
Smc4Q8CG47 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Smc4Q8CG47 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc4Q8CG47 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Smc4Q8CG47 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Smc4Q8CG47 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Smc4Q8CG47 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smc4Q8CG47 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Gm18889-201ENSMUST00000174284 929 ntBASIC18.58■□□□□ 0.56
Smc4Q8CG47 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Mir6990-201ENSMUST00000183724 91 ntBASIC18.58■□□□□ 0.56
Smc4Q8CG47 Gm44335-201ENSMUST00000196879 141 ntBASIC18.58■□□□□ 0.56
Smc4Q8CG47 Gm44297-201ENSMUST00000198304 141 ntBASIC18.58■□□□□ 0.56
Smc4Q8CG47 Gm44346-201ENSMUST00000198851 141 ntBASIC18.58■□□□□ 0.56
Smc4Q8CG47 Gm43767-201ENSMUST00000198933 381 ntBASIC18.58■□□□□ 0.56
Smc4Q8CG47 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.58■□□□□ 0.56
Smc4Q8CG47 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.58■□□□□ 0.56
Smc4Q8CG47 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.58■□□□□ 0.56
Smc4Q8CG47 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms