Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
E4f1Q8CCE9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
E4f1Q8CCE9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
E4f1Q8CCE9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
E4f1Q8CCE9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
E4f1Q8CCE9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
E4f1Q8CCE9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
E4f1Q8CCE9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.82■□□□□ 0.44
E4f1Q8CCE9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
E4f1Q8CCE9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
E4f1Q8CCE9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
E4f1Q8CCE9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Gm14701-201ENSMUST00000117156 348 ntBASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Gm15920-201ENSMUST00000118998 402 ntBASIC17.8■□□□□ 0.44
E4f1Q8CCE9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Gm44492-201ENSMUST00000197012 141 ntBASIC17.8■□□□□ 0.44
E4f1Q8CCE9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Gm7787-201ENSMUST00000216858 688 ntBASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
E4f1Q8CCE9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Gm7063-201ENSMUST00000186840 981 ntBASIC17.79■□□□□ 0.44
E4f1Q8CCE9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
E4f1Q8CCE9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.78■□□□□ 0.44
E4f1Q8CCE9 Gm17968-201ENSMUST00000194902 784 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms