Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Usp54Q8BL06 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Usp54Q8BL06 Gm8749-201ENSMUST00000117737 331 ntBASIC21.26■□□□□ 0.99
Usp54Q8BL06 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC21.26■□□□□ 0.99
Usp54Q8BL06 Gm18187-201ENSMUST00000196476 984 ntBASIC21.26■□□□□ 0.99
Usp54Q8BL06 Gm45384-201ENSMUST00000210451 277 ntBASIC21.26■□□□□ 0.99
Usp54Q8BL06 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp54Q8BL06 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Usp54Q8BL06 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp54Q8BL06 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp54Q8BL06 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp54Q8BL06 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp54Q8BL06 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp54Q8BL06 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp54Q8BL06 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp54Q8BL06 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC21.25■□□□□ 0.99
Usp54Q8BL06 Gm12091-201ENSMUST00000146791 830 ntBASIC21.25■□□□□ 0.99
Usp54Q8BL06 Ighv5-13-201ENSMUST00000193550 290 ntBASIC21.25■□□□□ 0.99
Usp54Q8BL06 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp54Q8BL06 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp54Q8BL06 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp54Q8BL06 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp54Q8BL06 BC001981-202ENSMUST00000191393 1545 ntBASIC21.25■□□□□ 0.99
Usp54Q8BL06 Gm20628-201ENSMUST00000177363 3215 ntBASIC21.24■□□□□ 0.99
Usp54Q8BL06 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp54Q8BL06 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Trav13-3-201ENSMUST00000117226 336 ntBASIC21.23■□□□□ 0.99
Usp54Q8BL06 Gm28631-201ENSMUST00000190740 334 ntBASIC21.23■□□□□ 0.99
Usp54Q8BL06 Gm10766-202ENSMUST00000194123 606 ntBASIC21.23■□□□□ 0.99
Usp54Q8BL06 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Gm9908-201ENSMUST00000211534 448 ntBASIC21.23■□□□□ 0.99
Usp54Q8BL06 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Gm15823-201ENSMUST00000064305 670 ntBASIC21.23■□□□□ 0.99
Usp54Q8BL06 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Gm37917-201ENSMUST00000194711 392 ntBASIC21.23■□□□□ 0.99
Usp54Q8BL06 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Usp54Q8BL06 Gm5763-201ENSMUST00000155951 1530 ntBASIC21.22■□□□□ 0.99
Usp54Q8BL06 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC21.22■□□□□ 0.99
Usp54Q8BL06 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp54Q8BL06 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp54Q8BL06 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp54Q8BL06 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp54Q8BL06 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp54Q8BL06 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp54Q8BL06 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp54Q8BL06 Gm9797-201ENSMUST00000052902 613 ntBASIC21.22■□□□□ 0.99
Usp54Q8BL06 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp54Q8BL06 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC21.22■□□□□ 0.99
Usp54Q8BL06 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp54Q8BL06 Gm28760-201ENSMUST00000185995 736 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms