Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rnf38Q8BI21 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf38Q8BI21 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf38Q8BI21 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Gm18669-201ENSMUST00000216049 778 ntBASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.62□□□□□ -0.07
Rnf38Q8BI21 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.62□□□□□ -0.07
Rnf38Q8BI21 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms