Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Samm50Q8BGH2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Samm50Q8BGH2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Samm50Q8BGH2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Samm50Q8BGH2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Samm50Q8BGH2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Samm50Q8BGH2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Samm50Q8BGH2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.77■□□□□ 0.44
Samm50Q8BGH2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.77■□□□□ 0.44
Samm50Q8BGH2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Samm50Q8BGH2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Samm50Q8BGH2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Samm50Q8BGH2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.77■□□□□ 0.43
Samm50Q8BGH2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Samm50Q8BGH2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Samm50Q8BGH2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Samm50Q8BGH2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Samm50Q8BGH2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Samm50Q8BGH2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Samm50Q8BGH2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Gm25990-201ENSMUST00000102440 86 ntBASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Gm10060-201ENSMUST00000212002 111 ntBASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Gm18622-201ENSMUST00000219361 595 ntBASIC17.75■□□□□ 0.43
Samm50Q8BGH2 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.75■□□□□ 0.43
Samm50Q8BGH2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Samm50Q8BGH2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms