Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim50Q810I2 Gm10499-201ENSMUST00000174094 934 ntBASIC14.76□□□□□ -0.05
Trim50Q810I2 Mir5126-201ENSMUST00000175513 77 ntBASIC14.76□□□□□ -0.05
Trim50Q810I2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.76□□□□□ -0.05
Trim50Q810I2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim50Q810I2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.76□□□□□ -0.05
Trim50Q810I2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trim50Q810I2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.76□□□□□ -0.05
Trim50Q810I2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trim50Q810I2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Trim50Q810I2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.76□□□□□ -0.05
Trim50Q810I2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim50Q810I2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Gm13036-201ENSMUST00000117799 748 ntBASIC14.75□□□□□ -0.05
Trim50Q810I2 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.75□□□□□ -0.05
Trim50Q810I2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim50Q810I2 Gm45167-201ENSMUST00000208007 322 ntBASIC14.75□□□□□ -0.05
Trim50Q810I2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim50Q810I2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Trim50Q810I2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim50Q810I2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim50Q810I2 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.75□□□□□ -0.05
Trim50Q810I2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim50Q810I2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim50Q810I2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.75□□□□□ -0.05
Trim50Q810I2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim50Q810I2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim50Q810I2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim50Q810I2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim50Q810I2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
Trim50Q810I2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trim50Q810I2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim50Q810I2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim50Q810I2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim50Q810I2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trim50Q810I2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim50Q810I2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim50Q810I2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms