Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm28599-201ENSMUST00000189838 694 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21867-201ENSMUST00000189917 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm29269-201ENSMUST00000190087 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21722-201ENSMUST00000190153 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm28423-201ENSMUST00000190701 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21899-201ENSMUST00000190745 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21910-201ENSMUST00000191163 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21849-201ENSMUST00000191571 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm28678-201ENSMUST00000191593 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm20910-201ENSMUST00000193268 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm21871-201ENSMUST00000194621 696 ntBASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trnp1Q80ZI1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Gm37917-201ENSMUST00000194711 392 ntBASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trnp1Q80ZI1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trnp1Q80ZI1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trnp1Q80ZI1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trnp1Q80ZI1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trnp1Q80ZI1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Gm27631-201ENSMUST00000184163 466 ntBASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Gm9899-201ENSMUST00000065519 555 ntBASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trnp1Q80ZI1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Gm6222-201ENSMUST00000120787 396 ntBASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trnp1Q80ZI1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms