Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim62Q80V85 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim62Q80V85 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim62Q80V85 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim62Q80V85 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim62Q80V85 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim62Q80V85 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim62Q80V85 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim62Q80V85 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim62Q80V85 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Trim62Q80V85 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Gm14494-201ENSMUST00000118786 435 ntBASIC15.64■□□□□ 0.09
Trim62Q80V85 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim62Q80V85 Gm17271-201ENSMUST00000165535 355 ntBASIC15.64■□□□□ 0.09
Trim62Q80V85 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.64■□□□□ 0.09
Trim62Q80V85 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.64■□□□□ 0.09
Trim62Q80V85 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.64■□□□□ 0.09
Trim62Q80V85 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim62Q80V85 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim62Q80V85 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim62Q80V85 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim62Q80V85 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim62Q80V85 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim62Q80V85 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim62Q80V85 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.63■□□□□ 0.09
Trim62Q80V85 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.63■□□□□ 0.09
Trim62Q80V85 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Trim62Q80V85 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.63■□□□□ 0.09
Trim62Q80V85 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim62Q80V85 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim62Q80V85 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Trim62Q80V85 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.62■□□□□ 0.09
Trim62Q80V85 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim62Q80V85 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trim62Q80V85 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.62■□□□□ 0.09
Trim62Q80V85 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trim62Q80V85 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim62Q80V85 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim62Q80V85 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim62Q80V85 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim62Q80V85 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Trim62Q80V85 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms