Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rpap1Q80TE0 Mir7085-201ENSMUST00000184353 66 ntBASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Gm10313-201ENSMUST00000095320 1002 ntBASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Gm5049-201ENSMUST00000195878 1590 ntBASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Gm12091-201ENSMUST00000146791 830 ntBASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Gm3436-201ENSMUST00000179930 840 ntBASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Gm18018-201ENSMUST00000198273 408 ntBASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Gm45668-201ENSMUST00000211271 493 ntBASIC23.25■■□□□ 1.31
Rpap1Q80TE0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Rpap1Q80TE0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Gm42918-201ENSMUST00000199249 1580 ntBASIC23.24■■□□□ 1.31
Rpap1Q80TE0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Gm11478-201ENSMUST00000117851 599 ntBASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Gm9522-201ENSMUST00000182394 926 ntBASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Gm45098-201ENSMUST00000207179 657 ntBASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Rpap1Q80TE0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Gm6222-201ENSMUST00000120787 396 ntBASIC23.22■■□□□ 1.31
Rpap1Q80TE0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Gm44719-201ENSMUST00000206404 149 ntBASIC23.22■■□□□ 1.31
Rpap1Q80TE0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Rpap1Q80TE0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Dancr-204ENSMUST00000132389 2347 ntBASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC23.21■■□□□ 1.31
Rpap1Q80TE0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Rpap1Q80TE0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC23.2■■□□□ 1.31
Rpap1Q80TE0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.31
Rpap1Q80TE0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms