Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.84■□□□□ 0.13
Prpf38bQ80SY5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Prpf38bQ80SY5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Prpf38bQ80SY5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
Prpf38bQ80SY5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Prpf38bQ80SY5 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.83■□□□□ 0.13
Prpf38bQ80SY5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Prpf38bQ80SY5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Prpf38bQ80SY5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Prpf38bQ80SY5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Gm15427-201ENSMUST00000117288 531 ntBASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Gm27646-201ENSMUST00000183989 110 ntBASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Prpf38bQ80SY5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Gm27301-201ENSMUST00000184012 127 ntBASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf38bQ80SY5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Gm43474-201ENSMUST00000196415 774 ntBASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Gm45167-201ENSMUST00000208007 322 ntBASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf38bQ80SY5 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms