Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx55Q6ZPL9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Asic1-205ENSMUST00000228185 1818 ntBASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx55Q6ZPL9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Gm43703-201ENSMUST00000200523 763 ntBASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
Ddx55Q6ZPL9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Celf4-206ENSMUST00000224553 1729 ntBASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Gm4875-201ENSMUST00000118257 786 ntBASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Gm28631-201ENSMUST00000190740 334 ntBASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Gm18187-201ENSMUST00000196476 984 ntBASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx55Q6ZPL9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms