Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim45Q6PFY8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Gm13036-201ENSMUST00000117799 748 ntBASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Psmb5-202ENSMUST00000227257 622 ntBASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim45Q6PFY8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Gm11764-201ENSMUST00000120221 623 ntBASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Gm6257-201ENSMUST00000163864 910 ntBASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim45Q6PFY8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim45Q6PFY8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim45Q6PFY8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms