Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nup98Q6PFD9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nup98Q6PFD9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Gm11424-201ENSMUST00000121929 829 ntBASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 BC037039-201ENSMUST00000192003 2205 ntBASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Gm15653-201ENSMUST00000119247 907 ntBASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Gm27437-201ENSMUST00000183429 107 ntBASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nup98Q6PFD9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Gm44855-201ENSMUST00000205725 362 ntBASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup98Q6PFD9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Asic1-205ENSMUST00000228185 1818 ntBASIC17.61■□□□□ 0.41
Nup98Q6PFD9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup98Q6PFD9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms