Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Mir5131-201ENSMUST00000175426 93 ntBASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac4Q6NZM9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Mir5126-201ENSMUST00000175513 77 ntBASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Gm18246-201ENSMUST00000221023 728 ntBASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.93■□□□□ 0.3
Hdac4Q6NZM9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.92■□□□□ 0.3
Hdac4Q6NZM9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms