Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC21.01■□□□□ 0.95
Knl1Q66JQ7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC21.01■□□□□ 0.95
Knl1Q66JQ7 AC139580.1-202ENSMUST00000223574 928 ntBASIC21.01■□□□□ 0.95
Knl1Q66JQ7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Knl1Q66JQ7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Knl1Q66JQ7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC21.01■□□□□ 0.95
Knl1Q66JQ7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Knl1Q66JQ7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Knl1Q66JQ7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Knl1Q66JQ7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Knl1Q66JQ7 Gm19430-201ENSMUST00000193847 2137 ntBASIC21.01■□□□□ 0.95
Knl1Q66JQ7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC21■□□□□ 0.95
Knl1Q66JQ7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC21■□□□□ 0.95
Knl1Q66JQ7 Mir1982-201ENSMUST00000157368 74 ntBASIC21■□□□□ 0.95
Knl1Q66JQ7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC21■□□□□ 0.95
Knl1Q66JQ7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC21■□□□□ 0.95
Knl1Q66JQ7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Gm5356-201ENSMUST00000093326 615 ntBASIC21■□□□□ 0.95
Knl1Q66JQ7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Mxra8os-201ENSMUST00000097740 687 ntBASIC21■□□□□ 0.95
Knl1Q66JQ7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC21■□□□□ 0.95
Knl1Q66JQ7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC21■□□□□ 0.95
Knl1Q66JQ7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Knl1Q66JQ7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Gm8062-201ENSMUST00000139696 444 ntBASIC21■□□□□ 0.95
Knl1Q66JQ7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Knl1Q66JQ7 Gm7067-201ENSMUST00000207698 1249 ntBASIC21■□□□□ 0.95
Knl1Q66JQ7 AC165157.4-201ENSMUST00000220587 139 ntBASIC21■□□□□ 0.95
Knl1Q66JQ7 Gm9257-201ENSMUST00000221254 232 ntBASIC21■□□□□ 0.95
Knl1Q66JQ7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Knl1Q66JQ7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Knl1Q66JQ7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Gm5912-201ENSMUST00000122282 1438 ntBASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Gm8242-201ENSMUST00000193029 1420 ntBASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Gm37230-201ENSMUST00000194491 818 ntBASIC20.99■□□□□ 0.95
Knl1Q66JQ7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Knl1Q66JQ7 BC001981-202ENSMUST00000191393 1545 ntBASIC20.99■□□□□ 0.95
Knl1Q66JQ7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Gm12742-201ENSMUST00000117326 410 ntBASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Knl1Q66JQ7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Mir1247-201ENSMUST00000116706 82 ntBASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Gm10313-201ENSMUST00000095320 1002 ntBASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Knl1Q66JQ7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms