Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VclQ64727 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VclQ64727 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VclQ64727 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VclQ64727 Gm10499-201ENSMUST00000174094 934 ntBASIC14.89□□□□□ -0.03
VclQ64727 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.89□□□□□ -0.03
VclQ64727 Gm5264-201ENSMUST00000190584 848 ntBASIC14.89□□□□□ -0.03
VclQ64727 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.89□□□□□ -0.03
VclQ64727 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VclQ64727 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
VclQ64727 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VclQ64727 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.89□□□□□ -0.03
VclQ64727 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Gm11779-201ENSMUST00000118541 368 ntBASIC14.88□□□□□ -0.03
VclQ64727 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.88□□□□□ -0.03
VclQ64727 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.88□□□□□ -0.03
VclQ64727 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.88□□□□□ -0.03
VclQ64727 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.88□□□□□ -0.03
VclQ64727 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Mir8117-201ENSMUST00000184773 107 ntBASIC14.88□□□□□ -0.03
VclQ64727 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VclQ64727 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.88□□□□□ -0.03
VclQ64727 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
VclQ64727 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
VclQ64727 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VclQ64727 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VclQ64727 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VclQ64727 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VclQ64727 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.87□□□□□ -0.03
VclQ64727 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
VclQ64727 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VclQ64727 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.87□□□□□ -0.03
VclQ64727 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Gm2213-201ENSMUST00000197485 688 ntBASIC14.87□□□□□ -0.03
VclQ64727 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.87□□□□□ -0.03
VclQ64727 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.87□□□□□ -0.03
VclQ64727 Gm18246-201ENSMUST00000221023 728 ntBASIC14.87□□□□□ -0.03
VclQ64727 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
VclQ64727 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VclQ64727 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VclQ64727 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VclQ64727 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
VclQ64727 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VclQ64727 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VclQ64727 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VclQ64727 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
VclQ64727 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.86□□□□□ -0.03
VclQ64727 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VclQ64727 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VclQ64727 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
VclQ64727 Sybu-209ENSMUST00000228639 4113 ntBASIC14.86□□□□□ -0.03
VclQ64727 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VclQ64727 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VclQ64727 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VclQ64727 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
VclQ64727 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.86□□□□□ -0.03
VclQ64727 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VclQ64727 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.86□□□□□ -0.03
VclQ64727 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VclQ64727 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms