Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gli3Q61602 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC20.12■□□□□ 0.81
Gli3Q61602 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC20.12■□□□□ 0.81
Gli3Q61602 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Gli3Q61602 Gm45930-201ENSMUST00000221330 292 ntBASIC20.12■□□□□ 0.81
Gli3Q61602 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Gli3Q61602 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC20.12■□□□□ 0.81
Gli3Q61602 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 Gm43758-201ENSMUST00000199500 367 ntBASIC20.12■□□□□ 0.81
Gli3Q61602 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC20.12■□□□□ 0.81
Gli3Q61602 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC20.12■□□□□ 0.81
Gli3Q61602 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gli3Q61602 BC001981-202ENSMUST00000191393 1545 ntBASIC20.11■□□□□ 0.81
Gli3Q61602 Gm7553-201ENSMUST00000185805 1426 ntBASIC20.11■□□□□ 0.81
Gli3Q61602 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Gli3Q61602 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gli3Q61602 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.11■□□□□ 0.81
Gli3Q61602 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gli3Q61602 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC20.11■□□□□ 0.81
Gli3Q61602 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gli3Q61602 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gli3Q61602 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gli3Q61602 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Gli3Q61602 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.1■□□□□ 0.81
Gli3Q61602 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Gli3Q61602 Gm15460-201ENSMUST00000118147 391 ntBASIC20.1■□□□□ 0.81
Gli3Q61602 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC20.1■□□□□ 0.81
Gli3Q61602 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC20.1■□□□□ 0.81
Gli3Q61602 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC20.1■□□□□ 0.81
Gli3Q61602 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 Gm13050-201ENSMUST00000122149 1345 ntBASIC20.1■□□□□ 0.81
Gli3Q61602 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC20.1■□□□□ 0.81
Gli3Q61602 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gli3Q61602 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gli3Q61602 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Gli3Q61602 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gli3Q61602 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gli3Q61602 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gli3Q61602 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC20.09■□□□□ 0.81
Gli3Q61602 Gm19184-201ENSMUST00000196798 928 ntBASIC20.09■□□□□ 0.81
Gli3Q61602 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC20.09■□□□□ 0.81
Gli3Q61602 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Gli3Q61602 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gli3Q61602 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC20.09■□□□□ 0.81
Gli3Q61602 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gli3Q61602 Tcf21-202ENSMUST00000218002 1788 ntBASIC20.08■□□□□ 0.81
Gli3Q61602 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Gli3Q61602 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Gli3Q61602 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gli3Q61602 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Gli3Q61602 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC20.08■□□□□ 0.81
Gli3Q61602 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gli3Q61602 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.08■□□□□ 0.81
Gli3Q61602 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gli3Q61602 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gli3Q61602 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gli3Q61602 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gli3Q61602 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gli3Q61602 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC20.08■□□□□ 0.8
Gli3Q61602 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC20.08■□□□□ 0.8
Gli3Q61602 Gm24644-201ENSMUST00000157114 139 ntBASIC20.08■□□□□ 0.8
Gli3Q61602 Mir5132-201ENSMUST00000175166 71 ntBASIC20.08■□□□□ 0.8
Gli3Q61602 Gm27847-201ENSMUST00000183711 107 ntBASIC20.08■□□□□ 0.8
Gli3Q61602 Gm27375-201ENSMUST00000183799 107 ntBASIC20.08■□□□□ 0.8
Gli3Q61602 Gm27516-201ENSMUST00000184237 98 ntBASIC20.08■□□□□ 0.8
Gli3Q61602 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gli3Q61602 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Gli3Q61602 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Gli3Q61602 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gli3Q61602 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gli3Q61602 Gm45667-201ENSMUST00000210380 1316 ntBASIC20.07■□□□□ 0.8
Gli3Q61602 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gli3Q61602 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gli3Q61602 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC20.07■□□□□ 0.8
Gli3Q61602 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gli3Q61602 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Gli3Q61602 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.07■□□□□ 0.8
Gli3Q61602 Gm22018-201ENSMUST00000104357 131 ntBASIC20.07■□□□□ 0.8
Gli3Q61602 Gm13464-201ENSMUST00000119418 935 ntBASIC20.07■□□□□ 0.8
Gli3Q61602 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms