Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Foxc1Q61572 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.18□□□□□ -0.62
Foxc1Q61572 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Foxc1Q61572 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Foxc1Q61572 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Gm25990-201ENSMUST00000102440 86 ntBASIC11.17□□□□□ -0.62
Foxc1Q61572 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Foxc1Q61572 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.17□□□□□ -0.62
Foxc1Q61572 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Gm1401-201ENSMUST00000122048 772 ntBASIC11.17□□□□□ -0.62
Foxc1Q61572 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.17□□□□□ -0.62
Foxc1Q61572 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.17□□□□□ -0.62
Foxc1Q61572 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC11.17□□□□□ -0.62
Foxc1Q61572 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.17□□□□□ -0.62
Foxc1Q61572 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC11.17□□□□□ -0.62
Foxc1Q61572 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.17□□□□□ -0.62
Foxc1Q61572 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.17□□□□□ -0.62
Foxc1Q61572 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Foxc1Q61572 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.17□□□□□ -0.62
Foxc1Q61572 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Foxc1Q61572 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Foxc1Q61572 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.16□□□□□ -0.62
Foxc1Q61572 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Foxc1Q61572 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.16□□□□□ -0.62
Foxc1Q61572 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Gm14201-201ENSMUST00000117627 289 ntBASIC11.16□□□□□ -0.62
Foxc1Q61572 Gm13418-201ENSMUST00000119097 944 ntBASIC11.16□□□□□ -0.62
Foxc1Q61572 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Foxc1Q61572 Gm11594-201ENSMUST00000122313 162 ntBASIC11.16□□□□□ -0.62
Foxc1Q61572 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.16□□□□□ -0.62
Foxc1Q61572 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Gm19164-201ENSMUST00000210667 640 ntBASIC11.16□□□□□ -0.62
Foxc1Q61572 CT009754.4-201ENSMUST00000221430 565 ntBASIC11.16□□□□□ -0.62
Foxc1Q61572 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.16□□□□□ -0.62
Foxc1Q61572 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.16□□□□□ -0.62
Foxc1Q61572 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
Foxc1Q61572 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.16□□□□□ -0.62
Foxc1Q61572 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Foxc1Q61572 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms