Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scaf1Q5U4C3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Gm12151-201ENSMUST00000121374 290 ntBASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Gm9182-201ENSMUST00000217829 639 ntBASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.65■□□□□ 0.74
Scaf1Q5U4C3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scaf1Q5U4C3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Scaf1Q5U4C3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm29310-201ENSMUST00000185468 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21825-201ENSMUST00000185728 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm29109-201ENSMUST00000185895 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21896-201ENSMUST00000186520 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21873-201ENSMUST00000186728 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21794-201ENSMUST00000187056 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21880-201ENSMUST00000187275 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21826-201ENSMUST00000187451 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21198-201ENSMUST00000188393 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21749-201ENSMUST00000189343 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21901-201ENSMUST00000189568 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm29424-201ENSMUST00000189716 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm28599-201ENSMUST00000189838 694 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21867-201ENSMUST00000189917 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm29269-201ENSMUST00000190087 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21722-201ENSMUST00000190153 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm28423-201ENSMUST00000190701 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21899-201ENSMUST00000190745 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21910-201ENSMUST00000191163 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21849-201ENSMUST00000191571 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm28678-201ENSMUST00000191593 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm20910-201ENSMUST00000193268 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm21871-201ENSMUST00000194621 696 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 AC132863.2-201ENSMUST00000226643 799 ntBASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scaf1Q5U4C3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Gm5186-201ENSMUST00000218781 920 ntBASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.63■□□□□ 0.73
Scaf1Q5U4C3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC19.62■□□□□ 0.73
Scaf1Q5U4C3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms