Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm14723-201ENSMUST00000118686 215 ntBASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col27a1Q5QNQ9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col27a1Q5QNQ9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Olfr286-202ENSMUST00000205305 969 ntBASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Gm15460-201ENSMUST00000118147 391 ntBASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col27a1Q5QNQ9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col27a1Q5QNQ9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col27a1Q5QNQ9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms