Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Cdkl5Q3UTQ8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkl5Q3UTQ8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Gm13036-201ENSMUST00000117799 748 ntBASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkl5Q3UTQ8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Mir5131-201ENSMUST00000175426 93 ntBASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Cdkl5Q3UTQ8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Cdkl5Q3UTQ8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl5Q3UTQ8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl5Q3UTQ8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Cdkl5Q3UTQ8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl5Q3UTQ8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.52■□□□□ 0.39
Cdkl5Q3UTQ8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl5Q3UTQ8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms