Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Znf48Q3US17 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.56□□□□□ -0.4
Znf48Q3US17 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Gm14057-201ENSMUST00000120631 482 ntBASIC12.56□□□□□ -0.4
Znf48Q3US17 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Gm36991-201ENSMUST00000191800 648 ntBASIC12.56□□□□□ -0.4
Znf48Q3US17 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.56□□□□□ -0.4
Znf48Q3US17 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.56□□□□□ -0.4
Znf48Q3US17 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Znf48Q3US17 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Znf48Q3US17 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.55□□□□□ -0.4
Znf48Q3US17 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Znf48Q3US17 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.55□□□□□ -0.4
Znf48Q3US17 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.55□□□□□ -0.4
Znf48Q3US17 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Gm25911-201ENSMUST00000157621 56 ntBASIC12.55□□□□□ -0.4
Znf48Q3US17 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
Znf48Q3US17 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.55□□□□□ -0.4
Znf48Q3US17 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.55□□□□□ -0.4
Znf48Q3US17 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.55□□□□□ -0.4
Znf48Q3US17 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.55□□□□□ -0.4
Znf48Q3US17 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Znf48Q3US17 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.55□□□□□ -0.4
Znf48Q3US17 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Znf48Q3US17 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Znf48Q3US17 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Znf48Q3US17 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Znf48Q3US17 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Znf48Q3US17 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms