Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Puf60Q3UEB3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.7■□□□□ 0.9
Puf60Q3UEB3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Puf60Q3UEB3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Puf60Q3UEB3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
Puf60Q3UEB3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Mir8102-201ENSMUST00000184148 139 ntBASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Puf60Q3UEB3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Gm5049-201ENSMUST00000195878 1590 ntBASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.68■□□□□ 0.9
Puf60Q3UEB3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Gm5479-201ENSMUST00000160578 435 ntBASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Gm27533-201ENSMUST00000183800 152 ntBASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Gm9063-201ENSMUST00000223299 582 ntBASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Prob1-201ENSMUST00000097619 3021 ntBASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Puf60Q3UEB3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Puf60Q3UEB3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Mir7684-201ENSMUST00000183858 60 ntBASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Gm5186-201ENSMUST00000218781 920 ntBASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Gm2423-201ENSMUST00000074863 733 ntBASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Tcf21-202ENSMUST00000218002 1788 ntBASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Puf60Q3UEB3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC20.65■□□□□ 0.9
Puf60Q3UEB3 Gm23547-201ENSMUST00000158210 271 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms