Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf1Q07802 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.34■□□□□ 0.05
Ebf1Q07802 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf1Q07802 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf1Q07802 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf1Q07802 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf1Q07802 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf1Q07802 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf1Q07802 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf1Q07802 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf1Q07802 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ebf1Q07802 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Ebf1Q07802 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf1Q07802 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf1Q07802 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf1Q07802 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf1Q07802 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf1Q07802 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ebf1Q07802 Gm18889-201ENSMUST00000174284 929 ntBASIC15.33■□□□□ 0.04
Ebf1Q07802 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ebf1Q07802 Gm43474-201ENSMUST00000196415 774 ntBASIC15.33■□□□□ 0.04
Ebf1Q07802 Gm20553-201ENSMUST00000204205 844 ntBASIC15.33■□□□□ 0.04
Ebf1Q07802 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.33■□□□□ 0.04
Ebf1Q07802 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.33■□□□□ 0.04
Ebf1Q07802 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf1Q07802 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Ebf1Q07802 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ebf1Q07802 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.33■□□□□ 0.04
Ebf1Q07802 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf1Q07802 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Ebf1Q07802 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf1Q07802 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.32■□□□□ 0.04
Ebf1Q07802 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ebf1Q07802 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ebf1Q07802 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.32■□□□□ 0.04
Ebf1Q07802 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.32■□□□□ 0.04
Ebf1Q07802 Gm18246-201ENSMUST00000221023 728 ntBASIC15.32■□□□□ 0.04
Ebf1Q07802 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.32■□□□□ 0.04
Ebf1Q07802 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf1Q07802 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ebf1Q07802 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ebf1Q07802 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Ebf1Q07802 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Ebf1Q07802 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf1Q07802 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf1Q07802 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf1Q07802 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.31■□□□□ 0.04
Ebf1Q07802 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf1Q07802 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf1Q07802 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.31■□□□□ 0.04
Ebf1Q07802 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf1Q07802 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.31■□□□□ 0.04
Ebf1Q07802 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf1Q07802 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.31■□□□□ 0.04
Ebf1Q07802 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf1Q07802 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Ebf1Q07802 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ebf1Q07802 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ebf1Q07802 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.31■□□□□ 0.04
Ebf1Q07802 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf1Q07802 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf1Q07802 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf1Q07802 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.3■□□□□ 0.04
Ebf1Q07802 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf1Q07802 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.3■□□□□ 0.04
Ebf1Q07802 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf1Q07802 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf1Q07802 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf1Q07802 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf1Q07802 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.3■□□□□ 0.04
Ebf1Q07802 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf1Q07802 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf1Q07802 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ebf1Q07802 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf1Q07802 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.3■□□□□ 0.04
Ebf1Q07802 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.3■□□□□ 0.04
Ebf1Q07802 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf1Q07802 Rpph1-201ENSMUST00000175096 319 ntBASIC15.3■□□□□ 0.04
Ebf1Q07802 Gm25948-201ENSMUST00000175334 112 ntBASIC15.3■□□□□ 0.04
Ebf1Q07802 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.3■□□□□ 0.04
Ebf1Q07802 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf1Q07802 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms