Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.72□□□□□ -0.53
Cdx4Q07424 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.72□□□□□ -0.53
Cdx4Q07424 AW822252-206ENSMUST00000208904 237 ntBASIC11.72□□□□□ -0.53
Cdx4Q07424 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.71□□□□□ -0.53
Cdx4Q07424 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Gm8344-201ENSMUST00000119813 856 ntBASIC11.71□□□□□ -0.53
Cdx4Q07424 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.71□□□□□ -0.53
Cdx4Q07424 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.71□□□□□ -0.53
Cdx4Q07424 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.71□□□□□ -0.53
Cdx4Q07424 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.71□□□□□ -0.53
Cdx4Q07424 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.71□□□□□ -0.53
Cdx4Q07424 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cdx4Q07424 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdx4Q07424 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdx4Q07424 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdx4Q07424 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdx4Q07424 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdx4Q07424 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdx4Q07424 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.71□□□□□ -0.54
Cdx4Q07424 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Cdx4Q07424 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdx4Q07424 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdx4Q07424 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx4Q07424 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx4Q07424 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx4Q07424 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdx4Q07424 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Cdx4Q07424 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.7□□□□□ -0.54
Cdx4Q07424 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx4Q07424 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx4Q07424 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx4Q07424 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Cdx4Q07424 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx4Q07424 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Cdx4Q07424 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx4Q07424 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx4Q07424 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdx4Q07424 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms