Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Thbs3Q05895 Gm27628-201ENSMUST00000184911 107 ntBASIC13.3□□□□□ -0.28
Thbs3Q05895 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.3□□□□□ -0.28
Thbs3Q05895 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Thbs3Q05895 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.3□□□□□ -0.28
Thbs3Q05895 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Thbs3Q05895 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Thbs3Q05895 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.29□□□□□ -0.28
Thbs3Q05895 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.29□□□□□ -0.28
Thbs3Q05895 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.29□□□□□ -0.28
Thbs3Q05895 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.29□□□□□ -0.28
Thbs3Q05895 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Thbs3Q05895 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.29□□□□□ -0.28
Thbs3Q05895 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.29□□□□□ -0.28
Thbs3Q05895 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.29□□□□□ -0.28
Thbs3Q05895 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Thbs3Q05895 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Thbs3Q05895 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Gm18246-201ENSMUST00000221023 728 ntBASIC13.28□□□□□ -0.28
Thbs3Q05895 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.28□□□□□ -0.28
Thbs3Q05895 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Thbs3Q05895 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Thbs3Q05895 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Thbs3Q05895 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Thbs3Q05895 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms