Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a1Q05722 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a1Q05722 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a1Q05722 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a1Q05722 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a1Q05722 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a1Q05722 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a1Q05722 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a1Q05722 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a1Q05722 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a1Q05722 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
Col9a1Q05722 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Gm13333-201ENSMUST00000119424 781 ntBASIC14.79□□□□□ -0.04
Col9a1Q05722 Mir1897-201ENSMUST00000122581 272 ntBASIC14.79□□□□□ -0.04
Col9a1Q05722 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.79□□□□□ -0.04
Col9a1Q05722 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Gm6257-201ENSMUST00000163864 910 ntBASIC14.79□□□□□ -0.04
Col9a1Q05722 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col9a1Q05722 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 AA619741-201ENSMUST00000195095 646 ntBASIC14.79□□□□□ -0.04
Col9a1Q05722 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.79□□□□□ -0.04
Col9a1Q05722 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.79□□□□□ -0.04
Col9a1Q05722 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.79□□□□□ -0.04
Col9a1Q05722 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col9a1Q05722 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col9a1Q05722 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a1Q05722 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col9a1Q05722 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.78□□□□□ -0.04
Col9a1Q05722 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.78□□□□□ -0.04
Col9a1Q05722 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.78□□□□□ -0.04
Col9a1Q05722 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Grk6-207ENSMUST00000225925 2769 ntBASIC14.78□□□□□ -0.04
Col9a1Q05722 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.78□□□□□ -0.04
Col9a1Q05722 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.78□□□□□ -0.04
Col9a1Q05722 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col9a1Q05722 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.78□□□□□ -0.04
Col9a1Q05722 Gm21854-201ENSMUST00000179901 471 ntBASIC14.78□□□□□ -0.04
Col9a1Q05722 Gm5370-201ENSMUST00000187187 574 ntBASIC14.78□□□□□ -0.04
Col9a1Q05722 Gm9723-201ENSMUST00000192100 457 ntBASIC14.78□□□□□ -0.04
Col9a1Q05722 Gm43553-201ENSMUST00000200900 685 ntBASIC14.78□□□□□ -0.04
Col9a1Q05722 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.78□□□□□ -0.04
Col9a1Q05722 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a1Q05722 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col9a1Q05722 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a1Q05722 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a1Q05722 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a1Q05722 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a1Q05722 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a1Q05722 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.77□□□□□ -0.05
Col9a1Q05722 Gm12467-201ENSMUST00000117625 745 ntBASIC14.77□□□□□ -0.05
Col9a1Q05722 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Col9a1Q05722 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a1Q05722 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.77□□□□□ -0.05
Col9a1Q05722 Gm9719-201ENSMUST00000162765 543 ntBASIC14.77□□□□□ -0.05
Col9a1Q05722 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a1Q05722 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a1Q05722 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a1Q05722 Mir8109-201ENSMUST00000184375 117 ntBASIC14.77□□□□□ -0.05
Col9a1Q05722 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a1Q05722 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.77□□□□□ -0.05
Col9a1Q05722 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.77□□□□□ -0.05
Col9a1Q05722 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.77□□□□□ -0.05
Col9a1Q05722 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a1Q05722 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a1Q05722 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a1Q05722 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.77□□□□□ -0.05
Col9a1Q05722 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a1Q05722 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms