Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ybx1P62960 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.5■□□□□ 0.07
Ybx1P62960 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.5■□□□□ 0.07
Ybx1P62960 Gm38294-201ENSMUST00000192831 381 ntBASIC15.5■□□□□ 0.07
Ybx1P62960 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.5■□□□□ 0.07
Ybx1P62960 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ybx1P62960 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Ybx1P62960 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ybx1P62960 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ybx1P62960 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.5■□□□□ 0.07
Ybx1P62960 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.49■□□□□ 0.07
Ybx1P62960 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Gm13223-201ENSMUST00000118609 747 ntBASIC15.49■□□□□ 0.07
Ybx1P62960 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.49■□□□□ 0.07
Ybx1P62960 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ybx1P62960 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.49■□□□□ 0.07
Ybx1P62960 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Ybx1P62960 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Ybx1P62960 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ybx1P62960 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ybx1P62960 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ybx1P62960 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Ybx1P62960 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ybx1P62960 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.48■□□□□ 0.07
Ybx1P62960 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Ybx1P62960 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.48■□□□□ 0.07
Ybx1P62960 Gm27618-201ENSMUST00000183671 60 ntBASIC15.48■□□□□ 0.07
Ybx1P62960 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.48■□□□□ 0.07
Ybx1P62960 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.48■□□□□ 0.07
Ybx1P62960 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.48■□□□□ 0.07
Ybx1P62960 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.48■□□□□ 0.07
Ybx1P62960 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Ybx1P62960 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.48■□□□□ 0.07
Ybx1P62960 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ybx1P62960 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.48■□□□□ 0.07
Ybx1P62960 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.47■□□□□ 0.07
Ybx1P62960 Gm12428-201ENSMUST00000119844 727 ntBASIC15.47■□□□□ 0.07
Ybx1P62960 Gm12151-201ENSMUST00000121374 290 ntBASIC15.47■□□□□ 0.07
Ybx1P62960 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.47■□□□□ 0.07
Ybx1P62960 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.47■□□□□ 0.07
Ybx1P62960 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.47■□□□□ 0.07
Ybx1P62960 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.47■□□□□ 0.07
Ybx1P62960 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms