Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.21□□□□□ -0.46
Lmo4P61969 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.21□□□□□ -0.46
Lmo4P61969 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lmo4P61969 Prob1-201ENSMUST00000097619 3021 ntBASIC12.21□□□□□ -0.46
Lmo4P61969 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lmo4P61969 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Lmo4P61969 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lmo4P61969 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Lmo4P61969 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Lmo4P61969 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.2□□□□□ -0.46
Lmo4P61969 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.2□□□□□ -0.46
Lmo4P61969 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.2□□□□□ -0.46
Lmo4P61969 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.2□□□□□ -0.46
Lmo4P61969 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lmo4P61969 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.19□□□□□ -0.46
Lmo4P61969 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lmo4P61969 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Lmo4P61969 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lmo4P61969 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Gm6415-201ENSMUST00000118488 348 ntBASIC12.19□□□□□ -0.46
Lmo4P61969 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lmo4P61969 Gm27622-201ENSMUST00000183779 60 ntBASIC12.19□□□□□ -0.46
Lmo4P61969 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.19□□□□□ -0.46
Lmo4P61969 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.19□□□□□ -0.46
Lmo4P61969 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.19□□□□□ -0.46
Lmo4P61969 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.19□□□□□ -0.46
Lmo4P61969 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lmo4P61969 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lmo4P61969 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lmo4P61969 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.18□□□□□ -0.46
Lmo4P61969 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.18□□□□□ -0.46
Lmo4P61969 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.18□□□□□ -0.46
Lmo4P61969 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.18□□□□□ -0.46
Lmo4P61969 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Lmo4P61969 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.18□□□□□ -0.46
Lmo4P61969 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.18□□□□□ -0.46
Lmo4P61969 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.18□□□□□ -0.46
Lmo4P61969 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lmo4P61969 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lmo4P61969 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms